miRBase entry: cja-mir-381

Stem-loop cja-mir-381

Accession

MI0031969

Description

Callithrix jacchus cja-mir-381 precursor miRNA

Sequence

guuugguacuuaaagcgagguugcccuuuguauauucgguuuauugacaugcaaUAUACAAGGGCAAGCUCUCUGUgaguaucaaac
((((((((((((.((.(((.((((((((.((((((((((((....))).)).))))))))))))))).))).)).))))))))))))

Structure

            a  c   g        u       -  -   u 
guuugguacuua ag gag uugcccuu guauauu cg guu a
|||||||||||| || ||| |||||||| ||||||| || |||  
caaacuaugagU UC CUC AACGGGAA CAUAUaa gu cag u
            G  U   G        -       c  a   u

Annotation confidence Not enough data

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Genome context

chr10: 126963292-126963378 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cja-mir-381

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-381

Accession	MIMAT0039446
Description	Callithrix jacchus cja-miR-381 mature miRNA
Sequence	55 - UAUACAAGGGCAAGCUCUCUGU - 76
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596