Stem-loop cja-mir-135a

Accession

MI0031972

Description

Callithrix jacchus cja-mir-135a precursor miRNA

Sequence

134 reads, 13.0 reads per million, 1 experiments

ccucgcuguucucUAUGGCUUUUUAUUCCUAUGUGAuucuacugcuaacucauauagggauuggagccguggcgcacggcgggg
(((((((((.(.((((((((((..((((((((((((.............)))))))))))).)))))))))).).)))))))))

Structure

         u u          UU            uucua 
ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
||||||||| | ||||||||||  ||||||||||||     u
ggggcggca g ggugccgagg  uagggauauacu     g
         c c          -u            caauc 

Annotation confidence Not enough data

Genome context

ref|NC_071456.1|: 28590981-28591064 [-]

Mature cja-miR-135a-5p

• Accession: MIMAT0039449
• Description: Callithrix jacchus cja-miR-135a-5p mature miRNA
• Sequence: 14 - UAUGGCUUUUUAUUCCUAUGUGA - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857