miRBase entry: cja-mir-92a-2

Stem-loop cja-mir-92a-2

Accession

MI0031978

Description

Callithrix jacchus cja-mir-92a-2 precursor miRNA

Sequence

gggaaaaucaaaccccuuucuacacagguugggaucgguugcaaugcuguguuucuguauggUAUUGCACUUGUCCCGGCCUGUugaguuugguggggauugugacc
........(((.((((...((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..))......)))).))).....

Structure

gggaaaau   a    ---uuu  ac            c   u           uu 
        caa cccc      cu  acagguugggau ggu gcaaugcugug  u
        ||| ||||      ||  |||||||||||| ||| |||||||||||   
        guu gggg      ga  UGUCCGGCCCUG UCA CGUUAUgguau  c
---ccagu   a    ugguuu  gu            U   -           gu

Annotation confidence Not enough data

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Genome context

chr1: 6515068-6515174 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-92a

Accession	MIMAT0039454
Description	Callithrix jacchus cja-miR-92a mature miRNA
Sequence	63 - UAUUGCACUUGUCCCGGCCUGU - 84
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596