miRBase entry: cja-mir-105

Stem-loop cja-mir-105

Accession

MI0031979

Description

Callithrix jacchus cja-mir-105 precursor miRNA

Sequence

gagugugcaucguggUCAAAUGCUCAGACUCCUGUGGuggcuguucaugcaccacggauguuugagcaugugcuacggugucuacuu
(((((.(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).))))))))))).)))))

Structure

     u         U  A          UC        gcug 
gagug gcaucgugg CA AUGCUCAGAC  CUGUGGug    u
||||| ||||||||| || ||||||||||  ||||||||     
uucau uguggcauc gu uacgaguuug  ggcaccac    u
     c         -  g          ua        guac

Annotation confidence Not enough data

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Genome context

chrX: 139305334-139305420 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-105

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-105

Accession	MIMAT0039455
Description	Callithrix jacchus cja-miR-105 mature miRNA
Sequence	16 - UCAAAUGCUCAGACUCCUGUGG - 37
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857