miRBase entry: cja-mir-3065

Stem-loop cja-mir-3065

Accession

MI0031984

Description

Callithrix jacchus cja-mir-3065 precursor miRNA

Sequence

ccucuucaacaaaaucacugaugcuggagucgugugagucaucacUCAGCACCAGGAUAUUGUUGGAgggg
((((((((((((.(((.(((.(((((.(((.(((.....))).)))))))).)))))).))))))))))))

Structure

            a   a   a     g   c   u 
ccucuucaacaa auc cug ugcug agu gug g
|||||||||||| ||| ||| ||||| ||| ||| a
ggggAGGUUGUU UAG GAC ACGAC Uca uac g
            A   -   C     -   c   u

Annotation confidence Not enough data

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Genome context

chr5: 130409544-130409614 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-3065

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-3065

Accession	MIMAT0039460
Description	Callithrix jacchus cja-miR-3065 mature miRNA
Sequence	46 - UCAGCACCAGGAUAUUGUUGGA - 67
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857