Stem-loop cja-mir-9-1

Accession

MI0031999

Description

Callithrix jacchus cja-mir-9-1 precursor miRNA

Sequence

2788 reads, 267.0 reads per million, 1 experiments

gggguugguuguuaUCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaacccc
(((((((....((((.(((((((((((((((.((((((.(.(....).).)))))).))))))))))))))).))))...)))))))

Structure

       guug    C               G      u g g 
gggguug    uuaU UUUGGUUAUCUAGCU UAUGAg g u u
|||||||    |||| ||||||||||||||| |||||| | |  
ccccaau    aAUG AAGCCAAUAGAUCGA AUAcuu u a g
       -aaa    A               A      c g g 

Annotation confidence High

Genome context

ref|NC_071459.1|: 10382272-10382358 [-]

Mature cja-miR-9-5p

• Accession: MIMAT0039475
• Description: Callithrix jacchus cja-miR-9-5p mature miRNA
• Sequence: 15 - UCUUUGGUUAUCUAGCUGUAUGA - 37
• Evidence: experimental ; Illumina [1]

Mature cja-miR-9-3p

• Accession: MIMAT0061560
• Description: Callithrix jacchus cja-miR-9-3p mature miRNA
• Sequence: 54 - AUAAAGCUAGAUAACCGAAAGUA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857