Stem-loop cja-mir-9-2

Accession

MI0032000

Description

Callithrix jacchus cja-mir-9-2 precursor miRNA

Sequence

2788 reads, 267.0 reads per million, 1 experiments

gaagcgaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguauuggucuucAUAAAGCUAGAUAACCGAAAGUAaaaacuccuuc
((((.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))))))

Structure

    c     g    C               G      u ua 
gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
|||| ||||| |||| ||||||||||||||| |||||| |  u
cuuc cucaa aAUG AAGCCAAUAGAUCGA AUAcuu c  g
    -     a    A               A      - ug 

Annotation confidence High

Genome context

ref|NC_071443.1|: 118926469-118926553 [+]

Mature cja-miR-9-5p

• Accession: MIMAT0039475
• Description: Callithrix jacchus cja-miR-9-5p mature miRNA
• Sequence: 15 - UCUUUGGUUAUCUAGCUGUAUGA - 37
• Evidence: experimental ; Illumina [1]

Mature cja-miR-9-3p

• Accession: MIMAT0061560
• Description: Callithrix jacchus cja-miR-9-3p mature miRNA
• Sequence: 52 - AUAAAGCUAGAUAACCGAAAGUA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857