Stem-loop cja-mir-769

Accession

MI0032004

Description

Callithrix jacchus cja-mir-769 precursor miRNA

Sequence

890 reads, 85.0 reads per million, 1 experiments

ggcucugaccUGAGACCUCUGGGUUCUGAGCUgugauguuacucucgagcUGGGAUCUCCGGGGUCUUGGUUcagggcc
((((((((.((((((((((.(((.(((.((((.(((........))))))).))).))).)))))))))).))))))))

Structure

        c          U   U   G    g   ugu 
ggcucuga cUGAGACCUC GGG UCU AGCU uga   u
|||||||| |||||||||| ||| ||| |||| |||    
ccgggacU GGUUCUGGGG CUC AGG Ucga gcu   a
        U          C   U   G    -   cuc 

Annotation confidence High

Genome context

ref|NC_071463.1|: 38753614-38753692 [+]

Mature cja-miR-769-5p

• Accession: MIMAT0039479
• Description: Callithrix jacchus cja-miR-769-5p mature miRNA
• Sequence: 11 - UGAGACCUCUGGGUUCUGAGCU - 32
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-769-3p

• Accession: MIMAT0061563
• Description: Callithrix jacchus cja-miR-769-3p mature miRNA
• Sequence: 51 - UGGGAUCUCCGGGGUCUUGGUU - 72
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596