Stem-loop cja-mir-1a-1

Accession

MI0032014

Description

Callithrix jacchus cja-mir-1a-1 precursor miRNA

Sequence

ccuacucagaguacauacuucuuuauguacccauaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuugguagg
((((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).))))))

Structure

      c                     ac     ug aca 
ccuacu agaguacauacuucuuuaugu  ccaua  a   u
|||||| |||||||||||||||||||||  |||||  |    
ggaugg uuuUAUGUAUGAAGAAAUGUA  GGUau  u   a
      u                     -A     cg aac 

Annotation confidence Not enough data

Genome context

chr13: 59037922-59038004 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-1a-1

Mature cja-miR-1a

• Accession: MIMAT0039490
• Description: Callithrix jacchus cja-miR-1a mature miRNA
• Sequence: 52 - UGGAAUGUAAAGAAGUAUGUAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857