Stem-loop cja-mir-1a-2

Accession

MI0032015

Description

Callithrix jacchus cja-mir-1a-2 precursor miRNA

Sequence

1 reads, 0.0 reads per million, 1 experiments

gcuugggaaacauacuucuuuauaugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAUcucaggc
((((((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).))))))))

Structure

        a                gc     ---   a 
gcuuggga acauacuucuuuauau  ccaua   ugg c
|||||||| ||||||||||||||||  |||||   ||| c
cggacucU UGUAUGAAGAAAUGUA  GGUau   auc u
        A                -A     cga   g 

Annotation confidence Not enough data

Genome context

ref|NC_071446.1|: 55834252-55834328 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-1a-2

Mature cja-miR-1a-3p

• Accession: MIMAT0039490
• Description: Callithrix jacchus cja-miR-1a-3p mature miRNA
• Sequence: 49 - UGGAAUGUAAAGAAGUAUGUAU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857