Stem-loop cja-mir-185

Accession

MI0032018

Description

Callithrix jacchus cja-mir-185 precursor miRNA

Sequence

3744 reads, 358.0 reads per million, 1 experiments

gggggcgagggauUGGAGAGAAAGGCAGUUCCUGAugguccccuccccAGGGGCUGGCUUUCCUCUGGUccuucccuccc
(((((.((((((((((((.(((((.(((((((((..((......)).))))))))).)))))))))))))))))))))).

Structure

-     c            A     G         Au  uc 
 ggggg gagggauUGGAG GAAAG CAGUUCCUG  gg  c
 ||||| |||||||||||| ||||| |||||||||  ||   
 ccucc cuuccUGGUCUC CUUUC GUCGGGGAc  cc  c
c     -            -     G         -c  uc 

Annotation confidence High

Genome context

ref|NC_071442.1|: 209262107-209262186 [+]

Mature cja-miR-185-5p

• Accession: MIMAT0039493
• Description: Callithrix jacchus cja-miR-185-5p mature miRNA
• Sequence: 14 - UGGAGAGAAAGGCAGUUCCUGA - 35
• Evidence: experimental ; Illumina [1]

Mature cja-miR-185-3p

• Accession: MIMAT0061565
• Description: Callithrix jacchus cja-miR-185-3p mature miRNA
• Sequence: 49 - AGGGGCUGGCUUUCCUCUGGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857