miRBase entry: cja-mir-449a

Stem-loop cja-mir-449a

Accession

MI0032020

Description

Callithrix jacchus cja-mir-449a precursor miRNA

Sequence

ugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUugaauaugugaauggcaucagcuaacaugcaacugcugucuuauugcauaua
(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))

Structure

             c       -    U          u aa   g 
ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
||||||||||||| ||||||| |||| |||||||||| |  |||  
auauacguuauuc gucguca cgua caaucgacua c  gua g
             u       a    -          - -g   a

Annotation confidence Not enough data

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Genome context

chr2: 152554232-152554319 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-449a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-449a

Accession	MIMAT0039495
Description	Callithrix jacchus cja-miR-449a mature miRNA
Sequence	15 - UGGCAGUGUAUUGUUAGCUGGU - 36
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857