Stem-loop cja-mir-449a

Accession

MI0032020

Description

Callithrix jacchus cja-mir-449a precursor miRNA

Sequence

994 reads, 95.0 reads per million, 1 experiments

ugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUugaauaugugaauggcaucagcuaacaugcaacugcugucuuauugcauaua
(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))

Structure

             c       -    U          u aa   g 
ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
||||||||||||| ||||||| |||| |||||||||| |  |||  
auauacguuauuc gucguca cgua caaucgacua c  gua g
             u       a    -          - -g   a 

Annotation confidence Not enough data

Genome context

ref|NC_071443.1|: 151491352-151491439 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-449a

Mature cja-miR-449a-5p

• Accession: MIMAT0039495
• Description: Callithrix jacchus cja-miR-449a-5p mature miRNA
• Sequence: 15 - UGGCAGUGUAUUGUUAGCUGGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857