Accession
MI0032027
Description
Callithrix jacchus
cja-mir-30d precursor miRNA
Sequence
4025
reads,
385.0
reads per million, 1 experiments
gaaagucuguuguUGUAAACAUCCCCGACUGGAAGCUguaagauucaacuaagCUUUCAGUCAGAUGUUUGCUGCuaccggcuauuc
...((((.((.((.(((((((((...(((((((((((..............))))))))))).))))))))).)).)).))))....
...((((.((.((.(((((((((...(((((((((((..............))))))))))).))))))))).)).)).))))....
Structure
-gaa u u U CCC guaaga
aguc gu gu GUAAACAUC GACUGGAAGCU u
|||| || || ||||||||| |||||||||||
ucgg ca CG CGUUUGUAG CUGACUUUCga u
cuua c u U --A aucaac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_071457.1|: 60921010-60921096 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-30d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-miR-30d-5p
| Accession | MIMAT0039501 |
| Description | Callithrix jacchus cja-miR-30d-5p mature miRNA |
| Sequence | 14 - UGUAAACAUCCCCGACUGGAAGCU - 37 |
| Evidence |
experimental
Illumina [1-2] |
Mature cja-miR-30d-3p
| Accession | MIMAT0061569 |
| Description | Callithrix jacchus cja-miR-30d-3p mature miRNA |
| Sequence | 54 - CUUUCAGUCAGAUGUUUGCUGC - 75 |
| Evidence |
experimental
Illumina [1-2] |
References
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