Stem-loop cja-mir-194-1

Accession

MI0032031

Description

Callithrix jacchus cja-mir-194-1 precursor miRNA

Sequence

88 reads, 8.0 reads per million, 1 experiments

ugguguuaucaagUGUAACAGCAACUCCAUGUGGAccguguaccaauuuccaguggagacgcuguuacuucugaugguuacca
(((((.(((((...((((((((..((((((.((((...((...))...))))))))))..))))))))...)))))..)))))

Structure

     -u     agU        AA      G    ccg  u 
uggug  uauca   GUAACAGC  CUCCAU UGGA   ug  
|||||  |||||   ||||||||  |||||| ||||   || a
accau  guagu   cauugucg  gaggug accu   ac  
     ug     cuu        ca      -    uua  c 

Annotation confidence Not enough data

Genome context

ref|NC_071460.1|: 4784026-4784108 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-194-1

Mature cja-miR-194-5p

• Accession: MIMAT0039505
• Description: Callithrix jacchus cja-miR-194-5p mature miRNA
• Sequence: 14 - UGUAACAGCAACUCCAUGUGGA - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857