Stem-loop cja-mir-223

Accession

MI0032032

Description

Callithrix jacchus cja-mir-223 precursor miRNA

Sequence

cccuggccuggccuccugcagugccacgcuccguguauuugacaagcugaguuagacacuccgugugguagagUGUCAGUUUGUCAAAUACCCCAagugugacacaugcuuagcagcuccagaccaggg
((((((.((((.((.((((((((.((((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))))).))).)))..)).))..)))).))))))

Structure

      c    -c  c  --   -   c      cc u              gaguua       cgu 
cccugg cugg  cu cu  gca gug cacgcu  g guauuugacaagcu      gacacuc   g
|||||| ||||  || ||  ||| ||| ||||||  | ||||||||||||||      |||||||   u
gggacc gacc  ga ga  cgu cac guguga  C CAUAAACUGUUUGA      CUGUgag   g
      a    uc  c  uu   a   a      AC C              ------       aug 

Annotation confidence Not enough data

Genome context

chrX: 57781089-57781217 [+]

Mature cja-miR-223

• Accession: MIMAT0039506
• Description: Callithrix jacchus cja-miR-223 mature miRNA
• Sequence: 74 - UGUCAGUUUGUCAAAUACCCCA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857