miRBase entry: cja-mir-134

Stem-loop cja-mir-134

Accession

MI0032034

Description

Callithrix jacchus cja-mir-134 precursor miRNA

Sequence

guccagggugUGUGACUGGUUGACCAGAGGGGcgugcacuguguucacccugugggccaccuagucaccaacccucagc
....(((((..((((((((.((.(((.((((..(.(((...))).).)))).)))..)).))))))))..)))))....

Structure

gucc     gU        U  -A   G    Gc u   c 
    agggu  GUGACUGG UG  CCA AGGG  g gca  
    |||||  |||||||| ||  ||| ||||  | ||| u
    uccca  cacugauc ac  ggu uccc  c ugu  
cgac     ac        c  cg   g    -a u   g

Annotation confidence Not enough data

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Genome context

chr10: 126972035-126972113 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-134

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-134

Accession	MIMAT0039508
Description	Callithrix jacchus cja-miR-134 mature miRNA
Sequence	11 - UGUGACUGGUUGACCAGAGGGG - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857