Stem-loop cja-mir-19b-1

Accession

MI0032036

Description

Callithrix jacchus cja-mir-19b-1 precursor miRNA

Sequence

acugaacacuguucuaugguuaguuuugcagguuugcauccagcugugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagugaaaagu
(((...(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))...)))

Structure

   gaa     uu                 -  -      uc    ugugu 
acu   cacug  cuaugguuaguuuugca gg uuugca  cagc     g
|||   |||||  ||||||||||||||||| || ||||||  ||||     a
uga   gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
   aaa     --                 A  U      --    ucuua 

Annotation confidence Not enough data

Genome context

chr1: 6514955-6515053 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-19b-1

Mature cja-miR-19b

• Accession: MIMAT0039509
• Description: Callithrix jacchus cja-miR-19b mature miRNA
• Sequence: 60 - UGUGCAAAUCCAUGCAAAACUGA - 82
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596