miRBase entry: cja-mir-361

Stem-loop cja-mir-361


Accession
MI0032040
Description
Callithrix jacchus cja-mir-361 precursor miRNA


Sequence

9523 reads, 911.0 reads per million, 1 experiments
gcaguggcaugcuugacagugauucuuuccugggauuugggagcUUAUCAGAAUCUCCAGGGGUACuuuauaauuuaaaaauguCCCCCAGGUGUGAUUCUGAUUUGcuuccuucuccucccacucugacaaucacuguuucauuagaagccucagc
((.(.((((((...((((((((((.((...(((((...((((((..(((((((((.((.((((.((................)).)))).))...)))))))))..))))))......)))))....)).)))))))))).))).....))).).))

Structure
  a u   -----   cuu          c  -ucc     ---uuu      UU         --U  A    U  uuuauaa 
gc g ggc     aug   gacagugauu uu    uggga      gggagc  AUCAGAAUC   CC GGGG AC       u
|| | |||     |||   |||||||||| ||    |||||      ||||||  |||||||||   || |||| ||        
cg c ccg     uac   uugucacuaa ag    acccu      ccuucG  UAGUCUUAG   GG CCCC ug       u
  a u   aagau   --u          c  ucuc     ccucuu      UU         UGU  A    C  uaaaaau 


Annotation confidence High
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Genome context
ref|NC_071464.1|: 79960084-79960240 [-]

Database links

Mature cja-miR-361-5p

Accession MIMAT0039513
Description Callithrix jacchus cja-miR-361-5p mature miRNA
Sequence 45 - UUAUCAGAAUCUCCAGGGGUAC - 66
Evidence experimental
Illumina [1-2]

Mature cja-miR-361-3p

Accession MIMAT0061575
Description Callithrix jacchus cja-miR-361-3p mature miRNA
Sequence 85 - CCCCCAGGUGUGAUUCUGAUUUG - 107
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596