Stem-loop cja-mir-26a-1

Accession

MI0032043

Description

Callithrix jacchus cja-mir-26a-1 precursor miRNA

Sequence

gccacaggcgccaagggcaggaggaccaaagcccuggcgaaggccguggccucgUUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaugggccuauucuugguuacuugcacggggacgcgggccuggacgccggcauccgggcucaggacucccccucucugccagaggc
(((.(.((((...((((..((((..((..((((((((((.((((((((.((((((.(((((((((.((((((((((...............)))))))))).))))))))).)))))).))).)))))...)))))......)))))..)).))))))))...)))).).)))

Structure

   a a    cca    ca    ga  aa     ------     --a     -   g      U         C          gugcag 
gcc c ggcg   aggg  ggag  cc  agccc      uggcg   aggcc gug ccucgU CAAGUAAUC AGGAUAGGCU      g
||| | ||||   ||||  ||||  ||  |||||      |||||   ||||| ||| |||||| ||||||||| ||||||||||      u
cgg g ccgu   uccc  ccuc  gg  ucggg      gccgc   uccgg cgc ggggca guucauugg ucuuauccgg      c
   a a    cuc    --    -a  ac     ccuacg     agg     g   a      c         u          guaacc 

Annotation confidence Not enough data

Genome context

chr17: 68419980-68420152 [+]

Mature cja-miR-26a

• Accession: MIMAT0039516
• Description: Callithrix jacchus cja-miR-26a mature miRNA
• Sequence: 55 - UUCAAGUAAUCCAGGAUAGGCU - 76
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596