Stem-loop cja-mir-26a-2

Accession

MI0032044

Description

Callithrix jacchus cja-mir-26a-2 precursor miRNA

Sequence

51888 reads, 4966.0 reads per million, 1 experiments

ggcuguggcuggaUUCAAGUAAUCCAGGAUAGGCUguuuccaucugugaggCCUAUUCUUGAUUACUUGUUUCuggaggcagcu
((((((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..))))))

Structure

      gg     UU         C          guuucc 
ggcugu  cugga  CAAGUAAUC AGGAUAGGCU      a
||||||  |||||  ||||||||| ||||||||||       
ucgacg  gguCU  GUUCAUUAG UCUUAUCCgg      u
      ga     UU         U          aguguc 

Annotation confidence High

Genome context

ref|NC_071450.1|: 58317637-58317720 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-26a-2

Mature cja-miR-26a-5p

• Accession: MIMAT0039516
• Description: Callithrix jacchus cja-miR-26a-5p mature miRNA
• Sequence: 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-26a-2-3p

• Accession: MIMAT0061576
• Description: Callithrix jacchus cja-miR-26a-2-3p mature miRNA
• Sequence: 52 - CCUAUUCUUGAUUACUUGUUUC - 73
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596