Stem-loop cja-mir-26b

Accession

MI0032045

Description

Callithrix jacchus cja-mir-26b precursor miRNA

Sequence

28740 reads, 2751.0 reads per million, 1 experiments

gcccccucaccccacccugcccgggacccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagCCUGUUCUCCAUUACUUGGCUcggggaccggugcacugcagccuuggggugagggggc
((((((((((((((..((((((((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..))))......))))...))))))))))))))

Structure

              -cc    ------    ga   -   U        UC           u ug 
gcccccucacccca   cugc      ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
||||||||||||||   ||||      ||||  ||| ||| ||||||||  ||||||||||| |   
cgggggaguggggu   gacg      ggcc  ggg UCG GUUCAUUA  UCUUGUCCgac c  u
              ucc    ucacgu    ag   c   -        CC           - ug 

Annotation confidence High

Genome context

ref|NC_071447.1|: 136632208-136632331 [+]

Mature cja-miR-26b-5p

• Accession: MIMAT0039517
• Description: Callithrix jacchus cja-miR-26b-5p mature miRNA
• Sequence: 32 - UUCAAGUAAUUCAGGAUAGGUU - 53
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-26b-3p

• Accession: MIMAT0061577
• Description: Callithrix jacchus cja-miR-26b-3p mature miRNA
• Sequence: 67 - CCUGUUCUCCAUUACUUGGCU - 87
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596