miRBase entry: cja-mir-133a-1

Stem-loop cja-mir-133a-1

Accession

MI0032058

Description

Callithrix jacchus cja-mir-133a-1 precursor miRNA

Sequence

caaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcauug
((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))))

Structure

      uuu    g       aa  u  a        gccuc 
caaugc   gcua agcuggu  aa gg accaaauc     u
||||||   |||| |||||||  || || ||||||||      
guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
      uau    G       AC  C  C        guaac

Annotation confidence Not enough data

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Genome context

chr13: 59034539-59034624 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-133a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-133a

Accession	MIMAT0039529
Description	Callithrix jacchus cja-miR-133a mature miRNA
Sequence	53 - UUGGUCCCCUUCAACCAGCUGU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857