miRBase entry: cja-mir-133b

Stem-loop cja-mir-133b

Accession

MI0032065

Description

Callithrix jacchus cja-mir-133b precursor miRNA

Sequence

ugccccuugcucuggcuggucaaacggaaccaaguccgucuuccugagaggUUUGGUCCCCUUCAACCAGCUacagcagggcuggca
(((((((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).)))))))..))))

Structure

    --       c        ca  c  a      u  g    c 
ugcc  ccuugcu uggcuggu  aa gg accaag cc ucuu  
||||  ||||||| ||||||||  || || |||||| || |||| c
acgg  gggacga aUCGACCA  UU CC UGGUUU gg agag  
    uc       c        AC  C  C      -  -    u

Annotation confidence Not enough data

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Genome context

chr4: 53431141-53431227 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-133b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-133b

Accession	MIMAT0039535
Description	Callithrix jacchus cja-miR-133b mature miRNA
Sequence	52 - UUUGGUCCCCUUCAACCAGCU - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857