Stem-loop cja-mir-548a

Accession

MI0032078

Description

Callithrix jacchus cja-mir-548a precursor miRNA

Sequence

54 reads, 5.0 reads per million, 1 experiments

gguuggugcAAUAGUAAUUGUGGAUUUUGUCauuaguuuuaaaggcaaaaacugcaauuacuuuuggaccagcc
(((((((.(((.(((((((((((.(((((((.(((....))).))))))).))))))))))).))).)))))))

Structure

       g   U           A       a   g 
gguuggu cAA AGUAAUUGUGG UUUUGUC uua u
||||||| ||| ||||||||||| ||||||| |||  
ccgacca guu ucauuaacguc aaaacgg aau u
       g   u           a       a   u 

Annotation confidence Not enough data

Genome context

ref|NC_071456.1|: 37654720-37654793 [+]

Mature cja-miR-548a-5p

• Accession: MIMAT0039547
• Description: Callithrix jacchus cja-miR-548a-5p mature miRNA
• Sequence: 10 - AAUAGUAAUUGUGGAUUUUGUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857