miRBase entry: cja-mir-34b

Stem-loop cja-mir-34b

Accession

MI0032079

Description

Callithrix jacchus cja-mir-34b precursor miRNA

Sequence

gugcucgguuuguaggcagugucauuagcugauuguacugugcugguuacAAUCACUAACUCCACUGCCAUCaaaacaaggcac
(((((..((((...(((((((...((((.((((((((((.....)).))))))))))))...)))))))....))))..)))))

Structure

     cg    -gua       uca    c        -  g 
gugcu  guuu    ggcagug   uuag ugauugua cu u
|||||  ||||    |||||||   |||| |||||||| || g
cacgg  caaa    CCGUCAC   AAUC ACUAAcau gg c
     aa    aCUA       CUC    -        u  u

Annotation confidence Not enough data

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Genome context

chr11: 9009508-9009591 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-34b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-34b

Accession	MIMAT0039548
Description	Callithrix jacchus cja-miR-34b mature miRNA
Sequence	51 - AAUCACUAACUCCACUGCCAUC - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857