Stem-loop cja-mir-548n-1

Accession

MI0032081

Description

Callithrix jacchus cja-mir-548n-1 precursor miRNA

Sequence

144 reads, 14.0 reads per million, 1 experiments

uauuagauugcugcaagaguaauugcgguuuucaguuacuuuucaGAAACUGCAGUUACUUUUGCAccaaccuuaua
(((.((.(((.(((((((((((((((((((((.............))))))))))))))))))))).))).)).)))

Structure

   u  a   c                     caguu 
uau ag uug ugcaagaguaauugcgguuuu     a
||| || ||| |||||||||||||||||||||     c
aua uc aac ACGUUUUCAUUGACGUCAAAG     u
   u  c   c                     acuuu 

Annotation confidence Not enough data

Genome context

ref|NC_071448.1|: 11512666-11512742 [+]

Mature cja-miR-548n-3p

• Accession: MIMAT0039550
• Description: Callithrix jacchus cja-miR-548n-3p mature miRNA
• Sequence: 46 - GAAACUGCAGUUACUUUUGCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857