Stem-loop cja-mir-330

Accession

MI0032086

Description

Callithrix jacchus cja-mir-330 precursor miRNA

Sequence

uuccaggaucgcgucccggccacuucgugcugugugaucuuuggcgaucacugccucucugggccugugucuuaggcucugcaagaucaaccgagCAAAGCACACGGCCUGCAGAGAggcagcgcucugccccuuacucggccgcgguguucaucggagaccuccaggga
((((.(((..(.(((((((.((((.((.((((.((((.....(((((.(.(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))).).)).)))..)))).)))))).))))....)))).))))))).))))

Structure

    a   uc c   -    ---c    u  u    u    ucuuu   -  u a           --    -    u   ag    ugcaa 
uucc gga  g guc ccgg    cacu cg gcug guga     ggc ga c cugccucucug  ggcc ugug cuu  gcuc     g
|||| |||  | ||| ||||    |||| || |||| ||||     ||| || | |||||||||||  |||| |||| |||  ||||     a
aggg ccu  c cag ggcu    gugg gc cggc cauu     ccg cu g gacggAGAGAC  CCGG ACAC GAA  Cgag     u
    a   -- -   a    acuu    c  -    u    ---cc   u  c c           GU    C    -   -A    ccaac 

Annotation confidence Not enough data

Genome context

chr22: 37708684-37708853 [-]

Mature cja-miR-330

• Accession: MIMAT0039554
• Description: Callithrix jacchus cja-miR-330 mature miRNA
• Sequence: 96 - CAAAGCACACGGCCUGCAGAGA - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857