Accession
MI0032086
Description
Callithrix jacchus
cja-mir-330 precursor miRNA
Sequence
2773
reads,
265.0
reads per million, 1 experiments
uuccaggaucgcgucccggccacuucgugcugugugaucuuuggcgaucacugccUCUCUGGGCCUGUGUCUUAGGCUcugcaagaucaaccgaGCAAAGCACACGGCCUGCAGAGAggcagcgcucugccccuuacucggccgcgguguucaucggagaccuccaggga
((((.(((..(.(((((((.((((.((.((((.((((.....(((((.(.(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))).).)).)))..)))).)))))).))))....)))).))))))).))))
((((.(((..(.(((((((.((((.((.((((.((((.....(((((.(.(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))).).)).)))..)))).)))))).))))....)))).))))))).))))
Structure
a uc c - ---c u u u ucuuu - u a -- - U AG ugcaa
uucc gga g guc ccgg cacu cg gcug guga ggc ga c cugccUCUCUG GGCC UGUG CUU GCUc g
|||| ||| | ||| |||| |||| || |||| |||| ||| || | ||||||||||| |||| |||| ||| |||| a
aggg ccu c cag ggcu gugg gc cggc cauu ccg cu g gacggAGAGAC CCGG ACAC GAA CGag u
a -- - a acuu c - u ---cc u c c GU C - -A ccaac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_071463.1|: 38389694-38389863 [-]
Database links
Mature cja-miR-330-5p
| Accession | MIMAT0061583 |
| Description | Callithrix jacchus cja-miR-330-5p mature miRNA |
| Sequence | 56 - UCUCUGGGCCUGUGUCUUAGGCU - 78 |
| Evidence |
experimental
Illumina [1] |
Mature cja-miR-330-3p
| Accession | MIMAT0039554 |
| Description | Callithrix jacchus cja-miR-330-3p mature miRNA |
| Sequence | 95 - GCAAAGCACACGGCCUGCAGAGA - 117 |
| Evidence |
experimental
Illumina [1] |
References
|
