miRBase entry: cja-mir-1258b

Stem-loop cja-mir-1258b

Accession

MI0032090

Description

Callithrix jacchus cja-mir-1258b precursor miRNA

Sequence

gcuccuguggcuuccacgaccuaauccuaacucuugcgaguccgcaGGAGUUAGGAUUAGGUCGUGGAagcuacaggcgc
((.(((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))).))

Structure

  u                                   a 
gc ccuguggcuuccacgaccuaauccuaacucuugcg g
|| |||||||||||||||||||||||||||||||||||  
cg ggacaucgaAGGUGCUGGAUUAGGAUUGAGGacgc u
  c                                   c

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr6: 38507622-38507701 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-1258b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-1258b

Accession	MIMAT0039558
Description	Callithrix jacchus cja-miR-1258b mature miRNA
Sequence	47 - GGAGUUAGGAUUAGGUCGUGGA - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857