Stem-loop cja-mir-505

Accession

MI0032093

Description

Callithrix jacchus cja-mir-505 precursor miRNA

Sequence

3268 reads, 313.0 reads per million, 1 experiments

ugaugcacccaguggGGGAGCCAGGAAGUAUUGAUGUUucugccaguuuagcGUCAACACUUGCUGGUUUCCUCUcuggagcauca
((((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).))))))

Structure

      ac    u           G    A        ucug 
ugaugc  ccag ggGGGAGCCAG AAGU UUGAUGUU    c
||||||  |||| ||||||||||| |||| ||||||||    c
acuacg  gguc CUCCUUUGGUC UUCA AACUGcga    a
      -a    U           G    C        uuug 

Annotation confidence High

Genome context

ref|NC_071464.1|: 132157178-132157263 [-]

Mature cja-miR-505-5p

• Accession: MIMAT0061585
• Description: Callithrix jacchus cja-miR-505-5p mature miRNA
• Sequence: 16 - GGGAGCCAGGAAGUAUUGAUGUU - 38
• Evidence: experimental ; Illumina [1]

Mature cja-miR-505-3p

• Accession: MIMAT0039561
• Description: Callithrix jacchus cja-miR-505-3p mature miRNA
• Sequence: 53 - GUCAACACUUGCUGGUUUCCUCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857