Stem-loop cja-mir-3074-2

Accession

MI0032101

Description

Callithrix jacchus cja-mir-3074-2 precursor miRNA

Sequence

cgggcuccaagcgggcuugaccccugUUCCUGCUGAACUGAGCCAGUgugcacaaaccaacuguguuucagcucaguaggcacgggaggcagagcccagggaggccg
(((.((((....((((((..(((((((.((((((((.((((((((((((......))..)))).).))))).)))))))).))))).))..))))))..)))).)))

Structure

   g    aagc      ga  -     U        A     - -    --  gc 
cgg cucc    gggcuu  cc ccugU CCUGCUGA CUGAG C CAGU  gu  a
||| ||||    ||||||  || ||||| |||||||| ||||| | ||||  ||   
gcc gagg    cccgag  gg gggca ggaugacu gacuu g guca  ca  c
   g    --ga      ac  a     c        c     u u    ac  aa 

Annotation confidence Not enough data

Genome context

chr22: 13069171-13069277 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-3074-2

Mature cja-miR-3074

• Accession: MIMAT0039568
• Description: Callithrix jacchus cja-miR-3074 mature miRNA
• Sequence: 27 - UUCCUGCUGAACUGAGCCAGU - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857