miRBase entry: cja-mir-371b

Stem-loop cja-mir-371b

Accession

MI0032104

Description

Callithrix jacchus cja-mir-371b precursor miRNA

Sequence

ucgguaacACUCAAAAAAUGGCGGCACUUUcaccagaacagaAAGUGCCCCCACAGUUUGAGUGgcacaggccga
(((((..((((((((...(((.(((((((((.........))))))))).)))...))))))))......)))))

Structure

     ----aa        AAA   C         acc 
ucggu      cACUCAAA   UGG GGCACUUUc   a
|||||      ||||||||   ||| |||||||||   g
agccg      GUGAGUUU   ACC CCGUGAAag   a
     gacacg        GAC   C         aca

Annotation confidence Not enough data

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Genome context

chr22: 45042630-45042704 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-371b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-371b-5p

Accession	MIMAT0039571
Description	Callithrix jacchus cja-miR-371b-5p mature miRNA
Sequence	9 - ACUCAAAAAAUGGCGGCACUUU - 30
Evidence	experimental Illumina [1]

Mature cja-miR-371b-3p

Accession	MIMAT0039572
Description	Callithrix jacchus cja-miR-371b-3p mature miRNA
Sequence	43 - AAGUGCCCCCACAGUUUGAGUG - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857