Stem-loop cja-mir-548o-2

Accession

MI0032112

Description

Callithrix jacchus cja-mir-548o-2 precursor miRNA

Sequence

aguagagguuggugcAAAAGUAAUUGCGGUCUUUGccguuacuuucaaugauaaaggccacuauuacuuuugccccaaaccuauauu
.(((.(((((((.(((((((((((.(.((((((((.((((......)))).)))))))).).))))))))))).)).))))).))).

Structure

a   g     -  u           U C        c    ac 
 gua agguu gg gcAAAAGUAAU G GGUCUUUG cguu  u
 ||| ||||| || ||||||||||| | |||||||| ||||   
 uau uccaa cc cguuuucauua c ccggaaau guaa  u
u   a     a  c           u a        a    cu 

Annotation confidence Not enough data

Genome context

chr4: 7997529-7997615 [-]

Mature cja-miR-548o

• Accession: MIMAT0039578
• Description: Callithrix jacchus cja-miR-548o mature miRNA
• Sequence: 16 - AAAAGUAAUUGCGGUCUUUG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857