Stem-loop cja-mir-548d-2

Accession

MI0032113

Description

Callithrix jacchus cja-mir-548d-2 precursor miRNA

Sequence

45 reads, 4.0 reads per million, 1 experiments

uugguguAAAAGUAAUUGUGGUUUUGGCCauuacuuucaauggcaaaaacaacaauuucuuuugcaccaa
.(((((((((((.((((((.(((((.((((((......)))))).))))).)))))).))))))))))).

Structure

u           U      G     G      ac 
 ugguguAAAAG AAUUGU GUUUU GCCauu  u
 ||||||||||| |||||| ||||| ||||||   
 accacguuuuc uuaaca caaaa cgguaa  u
a           u      a     a      cu 

Annotation confidence Not enough data

Genome context

ref|NC_071446.1|: 142137045-142137114 [-]

Mature cja-miR-548d-5p

• Accession: MIMAT0039579
• Description: Callithrix jacchus cja-miR-548d-5p mature miRNA
• Sequence: 8 - AAAAGUAAUUGUGGUUUUGGCC - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857