Stem-loop cja-mir-548d-1

Accession

MI0032114

Description

Callithrix jacchus cja-mir-548d-1 precursor miRNA

Sequence

65 reads, 6.0 reads per million, 1 experiments

aagguugguacAAAAGUAAUUGUGGUUUUGGCCauugcuuuuaauggcaauaaaugcaguuacuuuuguaucaaucuu
((((((((((((((((((((((((......(((((((....)))))))......))))))))))))))))))))))))

Structure

                        GUUUUG       c 
aagguugguacAAAAGUAAUUGUG      GCCauug u
||||||||||||||||||||||||      |||||||  
uucuaacuauguuuucauugacgu      cgguaau u
                        aaauaa       u 

Annotation confidence Not enough data

Genome context

ref|NC_071446.1|: 33450712-33450789 [+]

Mature cja-miR-548d-5p

• Accession: MIMAT0039579
• Description: Callithrix jacchus cja-miR-548d-5p mature miRNA
• Sequence: 12 - AAAAGUAAUUGUGGUUUUGGCC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857