Stem-loop cja-mir-499b

Accession

MI0032116

Description

Callithrix jacchus cja-mir-499b precursor miRNA

Sequence

gcguagggacgggaagcagcacagacuugcugugauguucacguggagaggaguuaAACAUCACUGCAAGUCUUAACggccgcccgcccaaggcgc
((.(.(((.((((..((.....((((((((.((((((((.((.(......).))..)))))))).)))))))).....))..))))))).).))..

Structure

--  g a   a    aa  agcac        u        -c  g gg 
  gc u ggg cggg  gc     agacuugc gugauguu  ac u  a
  || | ||| ||||  ||     |||||||| ||||||||  || |   
  cg a ccc gccc  cg     UCUGAACG CACUACAA  ug g  g
cg  g a   -    gc  gCAAU        U        au  a ga 

Annotation confidence Not enough data

Genome context

chr5: 2272825-2272920 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-499b

Mature cja-miR-499b

• Accession: MIMAT0039581
• Description: Callithrix jacchus cja-miR-499b mature miRNA
• Sequence: 57 - AACAUCACUGCAAGUCUUAAC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857