Stem-loop cja-mir-548s

Accession

MI0032117

Description

Callithrix jacchus cja-mir-548s precursor miRNA

Sequence

1 reads, 0.0 reads per million, 1 experiments

ggaacuucgauuagacuuuguauuagguuagugcaaaagucguugaaguuuuugccauuacuuuuAACGGCAAUGACUUUUGCACCAaccuaauacuaauucauaauacaugaguuuc
(((((((..((((((.((.((((((((((.(((((((((((((((..(((...............)))..))))))))))))))).)))))))))).)).)).))))....)))))))

Structure

       --cg    -  c  u          a               aa   uuugcc 
ggaacuu    auua ga uu guauuagguu gugcaaaagucguug  guu      a
|||||||    |||| || || |||||||||| |||||||||||||||  |||      u
cuuugag    uaau cu aa cauaauccaA CACGUUUUCAGUAAC  CAA      u
       uaca    a  u  u          C               GG   uuuuca 

Annotation confidence Not enough data

Genome context

ref|NC_071444.1|: 137011748-137011865 [+]

Mature cja-miR-548s-3p

• Accession: MIMAT0039582
• Description: Callithrix jacchus cja-miR-548s-3p mature miRNA
• Sequence: 66 - AACGGCAAUGACUUUUGCACCA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857