Stem-loop cja-mir-302a

Accession

MI0032121

Description

Callithrix jacchus cja-mir-302a precursor miRNA

Sequence

ggcuccccaccACUUAAACGUGGAUGUACUUGCUuugaaacgaaagaagUAAGUGCUUCCAUGUUUUGGUGAugguaaguc
((((..(((.((((.(((((((((.(((((((((((.........))))))))))).))))))))).)))).)))..))))

Structure

    cc   c    U         U           gaa 
ggcu  cca cACU AAACGUGGA GUACUUGCUuu   a
||||  ||| |||| ||||||||| |||||||||||   c
cuga  ggu GUGG UUUGUACCU CGUGAAUgaag   g
    au   A    U         U           aaa 

Annotation confidence Not enough data

Genome context

chr3: 80984725-80984805 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-302a

Mature cja-miR-302a-5p

• Accession: MIMAT0039586
• Description: Callithrix jacchus cja-miR-302a-5p mature miRNA
• Sequence: 12 - ACUUAAACGUGGAUGUACUUGCU - 34
• Evidence: experimental ; Illumina [1]

Mature cja-miR-302a-3p

• Accession: MIMAT0039587
• Description: Callithrix jacchus cja-miR-302a-3p mature miRNA
• Sequence: 50 - UAAGUGCUUCCAUGUUUUGGUGA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857