Stem-loop cja-mir-548c-1

Accession

MI0032140

Description

Callithrix jacchus cja-mir-548c-1 precursor miRNA

Sequence

15 reads, 1.0 reads per million, 1 experiments

aggcuggugCAAAAGUAAUUGUGGAUUUUGUcauuacuuucaauggcaaaaacaacaauuacuuuugcaacaaccu
(((.((.(((((((((((((((.(.((((((((((......)))))))))).).))))))))))))))).)).)))

Structure

   c  g               G A          ac 
agg ug ugCAAAAGUAAUUGU G UUUUGUcauu  u
||| || ||||||||||||||| | ||||||||||   
ucc ac acguuuucauuaaca c aaaacgguaa  u
   a  a               a a          cu 

Annotation confidence Not enough data

Genome context

ref|NC_071447.1|: 90381879-90381954 [+]

Mature cja-miR-548c-5p

• Accession: MIMAT0039603
• Description: Callithrix jacchus cja-miR-548c-5p mature miRNA
• Sequence: 10 - CAAAAGUAAUUGUGGAUUUUGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857