Stem-loop cja-mir-489

Accession

MI0032149

Description

Callithrix jacchus cja-mir-489 precursor miRNA

Sequence

guggcagcuugguggucguauguguggcgccauuuacuugauccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacugcuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure

       c     g             c c    ua     u 
guggcag uuggu gucguaugugugg g cauu  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u 

Annotation confidence Not enough data

Genome context

chr8: 54009869-54009952 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-489

Mature cja-miR-489

• Accession: MIMAT0039613
• Description: Callithrix jacchus cja-miR-489 mature miRNA
• Sequence: 52 - GUGACAUCACAUAUACGGCAGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857