miRBase entry: cja-mir-302c

Stem-loop cja-mir-302c

Accession

MI0032151

Description

Callithrix jacchus cja-mir-302c precursor miRNA

Sequence

ggguuccccuuugcuuuaacauggggguaccugcugugugaaacaaaagUAAGUGCUUCCAUGUUUCAGUGGaggugucucc
(((..(.((((((((..(((((((((((((.((((.(((...)))..)))).)))))))))))))..)))))))).)..)))

Structure

   uu c        uu             c    -g   g 
ggg  c ccuuugcu  aacauggggguac ugcu  ugu  
|||  | ||||||||  ||||||||||||| ||||  ||| a
ccu  g ggaGGUGA  UUGUACCUUCGUG AUga  aca  
   cu u        CU             A    aa   a

Annotation confidence Not enough data

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Genome context

chr3: 80984547-80984628 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-302c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-302c

Accession	MIMAT0039615
Description	Callithrix jacchus cja-miR-302c mature miRNA
Sequence	50 - UAAGUGCUUCCAUGUUUCAGUGG - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857