Stem-loop cja-mir-103b-2

Accession

MI0032157

Description

Callithrix jacchus cja-mir-103b-2 precursor miRNA

Sequence

89101 reads, 8527.0 reads per million, 1 experiments

agggcagcccauucuugguucuuUCAUAGCCCUGUACAAUGCUGCUugaccugaaugcuaCAAGGCAGCACUGUAAAGAAGCugaaagcacaaagacgcagcucu
(((((.((....((((.((.((((((..((.((.((((.((((((((...............)))))))).)))).))..)))))))).)).)))).)).)))))

Structure

     a  ccau    g  u      UA  -C  G    A        gaccug 
agggc gc    ucuu gu cuuUCA  GC  CU UACA UGCUGCUu      a
||||| ||    |||| || ||||||  ||  || |||| ||||||||      a
ucucg cg    agaa ca gaaagu  CG  GA AUGU ACGACGGA      u
     a  ---c    a  c      --  AA  A    C        ACaucg 

Annotation confidence Medium

Genome context

ref|NC_071446.1|: 9357798-9357902 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-103b-2

Mature cja-miR-103b-5p

• Accession: MIMAT0039622
• Description: Callithrix jacchus cja-miR-103b-5p mature miRNA
• Sequence: 24 - UCAUAGCCCUGUACAAUGCUGCU - 46
• Evidence: experimental ; Illumina [1]

Mature cja-miR-103b-2-3p

• Accession: MIMAT0061589
• Description: Callithrix jacchus cja-miR-103b-2-3p mature miRNA
• Sequence: 61 - CAAGGCAGCACUGUAAAGAAGC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857