miRBase entry: cja-mir-103b-1

Stem-loop cja-mir-103b-1

Accession

MI0032158

Description

Callithrix jacchus cja-mir-103b-1 precursor miRNA

Sequence

gaacaggucucaaugccuUCAUAGCCCUGUACAAUGCUGCUugauccauaugcaacaaggcagcacuguaaagaagccgagggcaguaagaaaauc
.......(((...(((((((...((.((.((((.((((((((...............)))))))).)))).))..)).)))))))...))).....

Structure

gaacagg   caa       AUA  -C  G    A        gaucca 
       ucu   ugccuUC   GC  CU UACA UGCUGCUu      u
       |||   |||||||   ||  || |||| ||||||||      a
       aga   acgggag   cg  ga augu acgacgga      u
--cuaaa   aug       --c  aa  a    c        acaacg

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr2: 29819340-29819435 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-103b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-103b

Accession	MIMAT0039622
Description	Callithrix jacchus cja-miR-103b mature miRNA
Sequence	19 - UCAUAGCCCUGUACAAUGCUGCU - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857