Stem-loop cja-mir-103b-1

Accession

MI0032158

Description

Callithrix jacchus cja-mir-103b-1 precursor miRNA

Sequence

88584 reads, 8478.0 reads per million, 1 experiments

gaacaggucucaaugccuUCAUAGCCCUGUACAAUGCUGCUugauccauaugcaaCAAGGCAGCACUGUAAAGAAGCcgagggcaguaagaaaauc
.......(((...(((((((...((.((.((((.((((((((...............)))))))).)))).))..)).)))))))...))).....

Structure

gaacagg   caa       AUA  -C  G    A        gaucca 
       ucu   ugccuUC   GC  CU UACA UGCUGCUu      u
       |||   |||||||   ||  || |||| ||||||||      a
       aga   acgggag   CG  GA AUGU ACGACGGA      u
--cuaaa   aug       --c  AA  A    C        ACaacg 

Annotation confidence Medium

Genome context

ref|NC_071443.1|: 29491690-29491785 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-103b-1

Mature cja-miR-103b-5p

• Accession: MIMAT0039622
• Description: Callithrix jacchus cja-miR-103b-5p mature miRNA
• Sequence: 19 - UCAUAGCCCUGUACAAUGCUGCU - 41
• Evidence: experimental ; Illumina [1]

Mature cja-miR-103b-1-3p

• Accession: MIMAT0061590
• Description: Callithrix jacchus cja-miR-103b-1-3p mature miRNA
• Sequence: 56 - CAAGGCAGCACUGUAAAGAAGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857