Stem-loop cja-mir-548y-2

Accession

MI0032162

Description

Callithrix jacchus cja-mir-548y-2 precursor miRNA

Sequence

64 reads, 6.0 reads per million, 1 experiments

aggucggugUGAAAGUAAUUGCGGUUUUUGCcauuacuguuauugaccaaaaaagcaauuacuuuugcaccaacuu
.(((.(((((((((((((((((..((((((.((..........))..)))))).))))))))))))))))).))).

Structure

a   c                 GG      -C  uuac 
 ggu ggugUGAAAGUAAUUGC  UUUUUG  ca    u
 ||| |||||||||||||||||  ||||||  ||     
 uca ccacguuuucauuaacg  aaaaac  gu    g
u   a                 -a      ca  uauu 

Annotation confidence Not enough data

Genome context

ref|NC_071457.1|: 87979248-87979323 [-]

Mature cja-miR-548y-5p

• Accession: MIMAT0039626
• Description: Callithrix jacchus cja-miR-548y-5p mature miRNA
• Sequence: 10 - UGAAAGUAAUUGCGGUUUUUGC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857