Stem-loop cja-mir-122

Accession

MI0032167

Description

Callithrix jacchus cja-mir-122 precursor miRNA

Sequence

54 reads, 5.0 reads per million, 1 experiments

cuuagcagagcugUGGAGUGUGACAAUGGUGUUUGugucuaaacuaucaaacgccauuaucacacuaaauagcuacugcuagg
((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).))))))))

Structure

        -      GG       C           ugucu 
cuuagcag agcugU  AGUGUGA AAUGGUGUUUG     a
|||||||| ||||||  ||||||| |||||||||||      
ggaucguc ucgaua  ucacacu uuaccgcaaac     a
        a      aa       a           uauca 

Annotation confidence Not enough data

Genome context

ref|NC_071454.1|: 96496660-96496742 [+]

Mature cja-miR-122-5p

• Accession: MIMAT0039630
• Description: Callithrix jacchus cja-miR-122-5p mature miRNA
• Sequence: 14 - UGGAGUGUGACAAUGGUGUUUG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857