Stem-loop cja-mir-544

Accession

MI0032172

Description

Callithrix jacchus cja-mir-544 precursor miRNA

Sequence

auuuucaucaccuagggaucuuguuaaaaagcagauucugauucagggaccaagAUUCUGCAUUUUUAGCAAGUUCucaagugaugcuaau
.....((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..)))))).....

Structure

auuuu      cua    u           -     u   gauuc 
     caucac   ggga cuuguuaaaaa gcaga ucu     a
     ||||||   |||| ||||||||||| ||||| |||     g
     guagug   cuCU GAACGAUUUUU CGUCU Aga     g
uaauc      -aa    U           A     U   accag 

Annotation confidence Not enough data

Genome context

chr10: 126966022-126966112 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cja-mir-544

Mature cja-miR-544

• Accession: MIMAT0039635
• Description: Callithrix jacchus cja-miR-544 mature miRNA
• Sequence: 55 - AUUCUGCAUUUUUAGCAAGUUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857