Stem-loop cja-mir-557

Accession

MI0032178

Description

Callithrix jacchus cja-mir-557 precursor miRNA

Sequence

ucagagagcaggccagcucaagggcaugcacacagagugggcaaaugaacaauaaauuuggaggucuggggcccucccucugcuggagauguaUUUGCAUGGGUGGGCCUUGUCUuuga
(((((((..(((((.(((((.(.(.((((((((((((.((((....((.(((.....)))....))....))))...))))).))....))))).).).))))).)))))..)))))))

Structure

       gc     a     a g c     ----  -     --u    aaau  ---a   u 
ucagaga  aggcc gcuca g g augca    ca cagag   gggc    ga    caa a
|||||||  ||||| ||||| | | |||||    || |||||   ||||    ||    ||| a
aguuUCU  UCCGG UGGGU C U Uaugu    gu gucuc   cccg    cu    guu a
       GU     G     A G U     agag  c     ccu    gggu  ggag   u 

Annotation confidence Not enough data

Genome context

GL289634.1: 99-217 [+]

Mature cja-miR-557

• Accession: MIMAT0039641
• Description: Callithrix jacchus cja-miR-557 mature miRNA
• Sequence: 94 - UUUGCAUGGGUGGGCCUUGUCU - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857