Stem-loop cja-mir-4772

Accession

MI0032188

Description

Callithrix jacchus cja-mir-4772 precursor miRNA

Sequence

156 reads, 15.0 reads per million, 1 experiments

ggcugggcucugugauugccUCUGAUGAGAUAAAGUUGCAGAcuugucuucccaaauagUCUGGAACUUUGCCUGAUCAGAauuagucacagagcaauacc
((....((((((((((((..((((((.((.(((((((.((((((.............)))))).))))))).)).))))))..))))))))))))....))

Structure

  cugg            cc      G  A       G      ugucu 
gg    gcucugugauug  UCUGAU AG UAAAGUU CAGAcu     u
||    ||||||||||||  |||||| || ||||||| ||||||     c
cc    cgagacacugau  AGACUA UC GUUUCAA GUCUga     c
  auaa            ua      G  C       G      uaaac 

Annotation confidence High

Genome context

ref|NC_071455.1|: 10348720-10348820 [+]

Mature cja-miR-4772-5p

• Accession: MIMAT0061591
• Description: Callithrix jacchus cja-miR-4772-5p mature miRNA
• Sequence: 21 - UCUGAUGAGAUAAAGUUGCAGA - 42
• Evidence: experimental ; Illumina [1]

Mature cja-miR-4772-3p

• Accession: MIMAT0039651
• Description: Callithrix jacchus cja-miR-4772-3p mature miRNA
• Sequence: 60 - UCUGGAACUUUGCCUGAUCAGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857