Stem-loop cja-mir-548u

Accession

MI0032198

Description

Callithrix jacchus cja-mir-548u precursor miRNA

Sequence

1 reads, 0.0 reads per million, 1 experiments

uugcauucugaaugucuuugguuggugcaaaaaauaaucgcaguuuuugcaauuuuuuuuuuaauugcGAGACUGCAGUUACUUUUGCaccaaccuaauauuuugaaaguag
.(((.(((.((((((....(((((((((((((..((((.((((((((.((((((........)))))))))))))).)))).)))))))))))))..)))))).))).))).

Structure

u   a   u      cuuu             aa    c        u      uuu 
 ugc uuc gaaugu    gguuggugcaaaa  uaau gcaguuuu gcaauu   u
 ||| ||| ||||||    |||||||||||||  |||| |||||||| ||||||    
 aug aag uuuaua    ccaaccaCGUUUU  AUUG CGUCAGAG cguuaa   u
g   a   u      --au             -C    A        -      uuu 

Annotation confidence Not enough data

Genome context

ref|NC_071450.1|: 103071629-103071739 [+]

Mature cja-miR-548u-3p

• Accession: MIMAT0039660
• Description: Callithrix jacchus cja-miR-548u-3p mature miRNA
• Sequence: 69 - GAGACUGCAGUUACUUUUGC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857