Stem-loop cja-mir-548k

Accession

MI0032199

Description

Callithrix jacchus cja-mir-548k precursor miRNA

Sequence

1 reads, 0.0 reads per million, 1 experiments

gugaaaauauuaguuuggugcaaaagucauugugguucuugccauuagaaguaaugcCAAAGACCGCAAUGACUUUUGCaccaagcuaauagcugcgc
(((....((((((((((((((((((((((((((((((.(((.(((((....))))).))).))))))))))))))))))))))))))))))....)))

Structure

   aaaa                              c   c     g 
gug    uauuaguuuggugcaaaagucauugugguu uug cauua a
|||    |||||||||||||||||||||||||||||| ||| |||||  
cgc    auaaucgaaccaCGUUUUCAGUAACGCCAG AAC guaau a
   gucg                              A   c     g 

Annotation confidence Not enough data

Genome context

ref|NC_071451.1|: 126933457-126933554 [+]

Mature cja-miR-548k-3p

• Accession: MIMAT0039661
• Description: Callithrix jacchus cja-miR-548k-3p mature miRNA
• Sequence: 58 - CAAAGACCGCAAUGACUUUUGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857