Stem-loop cja-mir-518b-4

Accession

MI0032204

Description

Callithrix jacchus cja-mir-518b-4 precursor miRNA

Sequence

6 reads, 1.0 reads per million, 1 experiments

uuccaugcugugacccuuuaaagggaagcgcuuuuuguugucugaaaggaaccAAAGGCCUUCCCUUUAGAGUGUuaccguuugagaa
.((((.((.(((((.(((((((((((((.((((((.(((.(......).))).))))))))))))))))))).))))).)).)).)).

Structure

u  -  u  u     c             c      u   g cu 
 uc ca gc gugac cuuuaaagggaag gcuuuu guu u  g
 || || || ||||| ||||||||||||| |||||| ||| |   
 ag gu ug cauUG GAGAUUUCCCUUC CGGAAA caa g  a
a  a  u  c     U             -      c   g aa 

Annotation confidence Not enough data

Genome context

ref|NC_071463.1|: 45511372-45511459 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-518b-4

Mature cja-miR-518b-3p

• Accession: MIMAT0039663
• Description: Callithrix jacchus cja-miR-518b-3p mature miRNA
• Sequence: 54 - AAAGGCCUUCCCUUUAGAGUGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857